Hello Michał Smereczyński,
Below are the troubleshooting ways to try resolving the issue: -
Firstly, as I mentioned earlier, check all the logs to see all log entries that the deployment has created under different status scenarios.
This issue might be a transient issue and sometimes redeploy or reapply option here to make the VM updates or VM work as expected without any conflict as shown below.
Also, you can use Get-WindowsUpdateLog command to get all the VM update log entries into a log file for better understanding.
Refer https://learn.microsoft.com/en-us/powershell/module/windowsupdate/get-windowsupdatelog?view=windowsserver2025-ps MS Doc for more relevant information.
Hope this helps.
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